Get module or simulation package dependencies

packages(sim, modules, paths, filenames, envir, clean = FALSE, ...)

# S4 method for ANY
packages(sim, modules, paths, filenames, envir,
  clean = FALSE, ...)

Arguments

sim

A simList object.

modules

Character vector, specifying the name or vector of names of module(s)

paths

Character vector, specifying the name or vector of names of paths(s) for those modules. If path not specified, it will be taken from getOption("spades.modulePath"), which is set with setPaths)

filenames

Character vector specifying filenames of modules (i.e. combined path & module. If this is specified, then modules and path are ignored.

envir

Optional environment in which to store parsed code. This may be useful if the same file is being parsed multiple times. This function will check in that envir for the parsed file before parsing again. If the envir is transient, then this will have no effect.

clean

Optional logical. If TRUE, it will scrub any references to github repositories, e.g., "PredictiveEcology/reproducible" will be returned as "reproducible"

...

All simInit parameters.

Value

A sorted character vector of package names.

See also

Other functions to access elements of a simList object: .addDepends, doEvent.checkpoint, envir, events, globals, inputs, modules, objs, params, paths, progressInterval, times